| 1 | Main Title (2nd Season, Soprano Version, Enhanced Stereo) | Fred Steiner & Alexander Courage | 1:06 |
| 2 | Who Mourns for Adonais?: Ship of Stars/Green Hand M11/M12 | Fred Steiner | 1:52 |
| 3 | Who Mourns for Adonais?: Giant Hand M13 | Fred Steiner | 1:15 |
| 4 | Who Mourns for Adonais?: Apollo Motif M14/M14A | Fred Steiner | 1:13 |
| 5 | Who Mourns for Adonais?: Apollo’s Power/Kirk’s Theme/Apollo’s Temple M21/M22/M23 | Fred Steiner | 3:18 |
| 6 | Who Mourns for Adonais?: Stingers/Giant Apollo M24/M24A/M24B/M24C/M24D/M25 | Fred Steiner | 1:04 |
| 7 | Who Mourns for Adonais?: Spaceship Stuck/Apollo Fades/Kirk to Apollo M26/M27/M28 | Fred Steiner | 1:19 |
| 8 | Who Mourns for Adonais?: Apollo Digs Carolyn/Apollo’s Fist/New Venus M29–30/M31/M32 | Fred Steiner | 2:39 |
| 9 | Who Mourns for Adonais?: Computer Generator M33 | Fred Steiner | 0:35 |
| 10 | Who Mourns for Adonais?: Apollo’s Temple #2 M34 | Fred Steiner | 2:59 |
| 11 | Who Mourns for Adonais?: Apollo Zaps M35–40 | Fred Steiner | 1:02 |
| 12 | Who Mourns for Adonais?: Apollo Weakens/Kirk to Enterprise/Bridge to Apollo M41/M42/M43 | Fred Steiner | 1:15 |
| 13 | Who Mourns for Adonais?: Kirk Worried M44–50 | Fred Steiner | 0:42 |
| 14 | Who Mourns for Adonais?: Apollo in Love M51 | Fred Steiner | 0:46 |
| 15 | Who Mourns for Adonais?: Dreamy Venus/Kirk and Carolyn/Spaceship Stuck Again M52/M53/M54 | Fred Steiner | 2:35 |
| 16 | Who Mourns for Adonais?: Apollo’s Kiss/Apollo’s Storm/Final Battle M55/M56-60/M61 | Fred Steiner | 3:38 |
| 17 | Who Mourns for Adonais?: End of Apollo/Spaceship Orbit M62/M63 | Fred Steiner | 2:54 |
| 18 | Mirror, Mirror: Mirror Mirror/Blackship Theme/The Agonizer M12/M12A/M12B | Fred Steiner | 2:24 |
| 19 | Mirror, Mirror: Blackship in Space/Blackship Underscore M13/M14 | Fred Steiner | 1:23 |
| 20 | Mirror, Mirror: Thematic Bridge/Blackship Tension M21/M21A | Fred Steiner | 2:20 |
| 21 | Mirror, Mirror: Suspicion M23 | Fred Steiner | 1:15 |
| 22 | Mirror, Mirror: Evil Kirk/Evil Kirk #2 M32/M33 | Fred Steiner | 0:39 |
| 23 | Mirror, Mirror: Meet Marlena/Short Curtain M36/37 | Fred Steiner | 2:02 |
| 24 | Mirror, Mirror: Blackship Theme M12AA | Fred Steiner | 0:49 |
| 25 | Mirror, Mirror: Pretty Marlena M46 | Fred Steiner | 1:23 |
| 26 | Mirror, Mirror: Goodbye Marlena M47–50 | Fred Steiner | 1:47 |
| 27 | By Any Other Name: Kelvan Theme/Neutralizer M12/M12A+M12AS | Fred Steiner | 1:32 |
| 28 | By Any Other Name: More Neutralizer M14 | Fred Steiner | 0:56 |
| 29 | By Any Other Name: Rojan’s Revenge/Rojan’s Blocks/Broken Block M22/M23/M24 | Fred Steiner | 3:05 |
| 30 | By Any Other Name: More Blocks/Rallentando M41/M42 | Fred Steiner | 2:06 |
| 31 | By Any Other Name: Pretty Words/Short Playoff M52/M55 | Fred Steiner | 1:50 |
| 32 | By Any Other Name: Kelinda’s Question/Rojan Roars/Kelinda’s Kiss M59/M61/M61A | Fred Steiner | 1:42 |
| 33 | By Any Other Name: Finale/Thematic Playoff M64/M64A | Fred Steiner | 1:19 |
| 34 | The Omega Glory: Drums | Fred Steiner | 0:21 |
| 35 | The Omega Glory: Star-Spangled Enterprise (act out) MX-1/MX-6 | Fred Steiner | 0:22 |
| 36 | The Omega Glory: Star-Spangled Enterprise (episode medley) MX-5/MX-4/MX-2 | Fred Steiner | 0:39 |
| 37 | The Omega Glory: Star-Spangled Enterprise (outtakes medley) MX-3/MX-7/MX-6 | Fred Steiner | 0:43 |
| 38 | Second Season Library Music: Kirk to Apollo M28A (from “Who Mourns for Adonais?”) | Fred Steiner | 0:27 |
| 39 | Second Season Library Music: The Agonizer M12BA | Fred Steiner | 0:27 |
| 40 | Second Season Library Music: Blackship in Space M13A (from “Mirror, Mirror”) | Fred Steiner | 0:39 |
| 41 | Second Season Library Music: Blackship in Space M13B (from “Mirror, Mirror”) | Fred Steiner | 0:24 |
| 42 | Second Season Library Music: Blackship Tension M21AA (from “Mirror, Mirror”) | Fred Steiner | 1:04 |
| 43 | Second Season Library Music: Blackship Tension M21A (from “Mirror, Mirror”) | Fred Steiner | 0:37 |
| 44 | Second Season Library Music: Suspicion M23A (from “Mirror, Mirror”) | Fred Steiner | 0:39 |
| 45 | Second Season Library Music: Meet Marlena M36A (from “Mirror, Mirror”) | Fred Steiner | 0:51 |
| 46 | Second Season Library Music: Kelvan Theme M12 tk 5 (from “By Any Other Name”) | Fred Steiner | 0:42 |
| 47 | Second Season Library Music: Neutralizer M12AA (from “By Any Other Name”) | Fred Steiner | 1:01 |
| 48 | Second Season Library Music: Rojan’s Blocks M23A tk 3 (from “By Any Other Name”) | Fred Steiner | 0:42 |
| 49 | Second Season Library Music: Short Playoff M55A (from “By Any Other Name”) | Fred Steiner | 0:17 |
| 50 | Second Season Library Music: Chess Game (M32, recorded with “Who Mourns for Adonais?”) LM50 (from “Charlie X”) | Fred Steiner | 1:26 |
| 51 | Second Season Library Music: Zap Sam (M41, recorded with “Who Mourns for Adonais?”) LM51 (from “Charlie X”) | Fred Steiner | 1:13 |
| 52 | Second Season Library Music: Goodbye Charlie (M62, 2 versions, recorded with “By Any Other Name”) LM53 (from “Charlie X”) | Fred Steiner | 1:33 |
| 53 | Second Season Library Music: Fesarius Approaches (M31A, recorded with “Mirror, Mirror”) LM52 (from “The Corbomite Maneuver”) | Fred Steiner | 2:19 |
| 54 | Second Season Library Music: End Title (2nd Season, Soprano Version, Enhanced Stereo) | Fred Steiner & Alexander Courage | 0:47 |